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Institute For Systems Biology

  • Renton, WA
  • Tax-exempt since March 2000
  • EIN: 91-2003593

Organization summary

Type of Nonprofit

Designated as a Organizations for any of the following purposes: religious, educational, charitable, scientific, literary, testing for public safety, fostering national or international amateur sports competition (as long as it doesn't provide athletic facilities or equipment), or the prevention of cruelty to children or animals.

Category: Science and Technology Research Institutes, Services / Biological, Life Science Research (NTEE)

Donations to this organization are tax deductible.

Summary charts: organization finances over time

Revenue
$43.6M (2023)

Expenses
$46.8M (2023)

Total Assets
$121M (2023)

Total Liabilities
$58.6M (2023)

Source: Form 990 tax filings from 2011 to 2023

Tax Filings and Audits by Year

Form 990 is an information return that most organizations claiming federal tax-exempt status must file yearly with the IRS. Nonprofit Explorer has IRS digitized Form 990 data for filings processed in 2012 and later. If this organization filed an amended return, it may not be reflected below. Duplicate download links may indicate a resubmission or amendment to this organization's original return. Form 990 data is from the IRS.

Audits are required to be submitted by nonprofit organizations that spend $750,000 or more in federal grant money in a fiscal year. "Single audits" look at the entire organization's finances and compliance, while other audits are program specific. Nonprofit Explorer has PDFs of audits for some nonprofits for fiscal year 2015 and later. Audit data is from the Federal Audit Clearinghouse.

Fiscal Year Ending Dec.
2023

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$43,611,326
Expenses
$46,752,331
Net Income
-$3,141,005
Net Assets
$62,630,122
Notable Sources of Revenue Percent of Total Revenue
Contributions $40,929,618
93.9%
Program Services $805,238
1.8%
Investment Income $1,426,485
3.3%
Bond Proceeds $0
Royalties $399,708
0.9%
Rental Property Income -$413,403
Net Fundraising $0
Sales of Assets $68,773
0.2%
Net Inventory Sales $0
Other Revenue $394,907
0.9%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,297,535
2.8%
Professional Fundraising Fees $0
Other Salaries and Wages $16,119,787
34.5%
Assets/Debt
Total Assets $121,196,657
Total Liabilities $58,566,535
Net Assets $62,630,122
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $461,454 $0 $57,871
Nitin Baliga Phd (Svp Dir Of Integrative Science/Prof) $344,533 $0 $63,175
Kathy Scanlan (Coo/Treasurer) $317,474 $0 $53,029
Andrew Magis (Director Of Data Science) $293,494 $0 $42,588
Robert L Mortiz Phd (Professor) $272,937 $0 $38,548
Ilya Shmulevich Phd (Professor) $250,011 $0 $64,003
Sui Huang Md Phd (Professor) $237,660 $0 $45,974
Eric Deutsch (Principal Scientist) $188,819 $0 $43,748
Wasif Rasheed (Director) $0 $2,873,189 $260,778
Ari Robicsek Md (Director) $0 $2,010,519 $224,154
Amy Compton Phillips Md (Director) $0 $2,017,976 $0
Leroy Hood Md Phd (Director) $0 $646,351 $2,213
Brian V Turner (Director) $0 $0 $0
Charles Watts Md (Board Chair) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
David Sabey (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Heather Redman (Director) $0 $0 $0
Melanie L Mayer Phd (Director (Part Year)) $0 $0 $0
Nancy Allbritton Md Phd (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Stephen M Graham (Director Thru 6/23) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
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Document Links

990
Filed on Nov. 12, 2024

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
XML
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2022

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$37,072,888
Expenses
$41,968,785
Net Income
-$4,895,897
Net Assets
$61,681,006
Notable Sources of Revenue Percent of Total Revenue
Contributions $34,972,830
94.3%
Program Services $692,277
1.9%
Investment Income $1,109,267
3.0%
Bond Proceeds $0
Royalties $465,399
1.3%
Rental Property Income -$26,043
Net Fundraising $0
Sales of Assets -$459,096
Net Inventory Sales $0
Other Revenue $318,254
0.9%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,242,908
3.0%
Professional Fundraising Fees $0
Other Salaries and Wages $14,741,594
35.1%
Assets/Debt
Total Assets $126,586,860
Total Liabilities $64,905,854
Net Assets $61,681,006
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $460,211 $0 $50,397
Nitin Baliga Phd (Svp Dir Of Integrative Science/Prof) $323,964 $0 $56,652
Kathy Scanlan (Coo/Treasurer) $303,628 $0 $48,057
Andrew Magis Phd (Director Of Data Science) $303,533 $0 $41,389
Robert L Mortiz Phd (Professor) $270,337 $0 $39,559
Ilya Shmulevich Phd (Professor) $242,730 $0 $57,119
Sui Huang Md Phd (Professor) $236,489 $0 $41,908
Eric Deutsch (Principal Scientist) $189,369 $0 $40,210
Amy Compton Phillips Md (Director) $0 $3,802,673 $8,688
Wasif Rasheed (Director) $0 $2,338,077 $391,090
Ari Robicsek Md (Director (Part Year)) $0 $1,339,393 $286,631
Leroy Hood Md Phd (Director) $0 $912,931 $21,066
Brian V Turner (Director) $0 $0 $0
Charles Watts Md (Board Chair) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
David Sabey (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Heather Redman (Director) $0 $0 $0
Michael E Phelps Phd (Director) $0 $0 $0
Nancy Allbritton Md Phd (Director (Part Year)) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Stephen M Graham (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
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990
Filed on Nov. 14, 2023

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2021

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$43,313,392
Expenses
$38,933,529
Net Income
$4,379,863
Net Assets
$73,696,982
Notable Sources of Revenue Percent of Total Revenue
Contributions $34,941,577
80.7%
Program Services $1,394,165
3.2%
Investment Income $1,013,220
2.3%
Bond Proceeds $0
Royalties $462,195
1.1%
Rental Property Income $220,328
0.5%
Net Fundraising $0
Sales of Assets $2,007,449
4.6%
Net Inventory Sales $0
Other Revenue $3,274,458
7.6%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,195,705
3.1%
Professional Fundraising Fees $0
Other Salaries and Wages $14,050,771
36.1%
Assets/Debt
Total Assets $81,550,518
Total Liabilities $7,853,536
Net Assets $73,696,982
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $460,021 $0 $48,871
Nitin Baliga Phd (Svp Dir Of Integrative Science/Prof) $300,274 $0 $48,424
Kathy Scanlan (Coo/Treasurer) $290,412 $0 $47,702
Robert L Mortiz Phd (Professor) $270,573 $0 $38,977
Ilya Shmulevich Phd (Professor) $246,006 $0 $52,896
Sui Huang Md Phd (Professor) $214,731 $0 $39,258
Hakon Verespej (Software Enginneer 4) $198,441 $0 $24,706
Eric Deutsch (Principal Scientist) $178,831 $0 $38,311
Amy Compton Phillips Md (Director) $0 $1,886,882 $303,676
Wasif Rasheed (Director) $0 $1,276,345 $342,458
Leroy Hood Md Phd (Director) $0 $971,371 $80,483
Charles Watts Md (Board Chair) $0 $0 $0
Brian V Turner (Director) $0 $0 $0
Christine Schaeffer Phd (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
David Sabey (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Heather Redman (Director (Part Year)) $0 $0 $0
Michael E Phelps Phd (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Stephen M Graham (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
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990
Filed on Nov. 8, 2022

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
XML
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2020

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$39,847,320
Expenses
$40,513,307
Net Income
-$665,987
Net Assets
$67,161,593
Notable Sources of Revenue Percent of Total Revenue
Contributions $35,918,614
90.1%
Program Services $820,912
2.1%
Investment Income $979,193
2.5%
Bond Proceeds $0
Royalties $436,806
1.1%
Rental Property Income $506,619
1.3%
Net Fundraising -$3,020
Sales of Assets $1,091,027
2.7%
Net Inventory Sales $0
Other Revenue $97,169
0.2%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,183,039
2.9%
Professional Fundraising Fees $0
Other Salaries and Wages $15,595,916
38.5%
Assets/Debt
Total Assets $80,193,323
Total Liabilities $13,031,730
Net Assets $67,161,593
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $464,810 $0 $31,575
Nitin Baliga Phd (Svp Dir Of Integrative Science/Prof) $298,632 $0 $49,146
Kathy Scanlan (Coo/Treasurer) $293,015 $0 $45,312
Robert L Mortiz Phd (Professor) $269,321 $0 $39,518
Ilya Shmulevich Phd (Professor) $243,529 $0 $52,225
Nathan Price Phd (Assoc Dir Int. Science/Prof(pt Year)) $216,097 $0 $47,208
Sui Huang Md Phd (Professor) $200,662 $0 $33,413
Andrew Magis Phd (Dir Of Data Science) $173,167 $0 $40,280
Amy Compton Phillips Md (Director) $0 $1,709,011 $533,089
Venkat Bhamidipati (Director (Part Year)) $0 $2,084,131 $22,680
Leroy Hood Md Phd (Director) $0 $975,200 $76,870
Brian V Turner (Director) $0 $0 $0
Charles Watts Md (Board Chair) $0 $0 $0
Christine Schaeffer Phd (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
David Sabey (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Mary Woolley (Director (Part Year)) $0 $0 $0
Michael E Phelps Phd (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Stephen M Graham (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
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990
Filed on Nov. 14, 2021

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2019

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$36,230,866
Expenses
$41,016,030
Net Income
-$4,785,164
Net Assets
$63,505,387
Notable Sources of Revenue Percent of Total Revenue
Contributions $31,942,059
88.2%
Program Services $808,888
2.2%
Investment Income $1,286,177
3.5%
Bond Proceeds $0
Royalties $546,012
1.5%
Rental Property Income $652,672
1.8%
Net Fundraising -$29,394
Sales of Assets $214,664
0.6%
Net Inventory Sales $0
Other Revenue $809,788
2.2%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,171,943
2.9%
Professional Fundraising Fees $0
Other Salaries and Wages $13,792,793
33.6%
Assets/Debt
Total Assets $73,280,105
Total Liabilities $9,774,718
Net Assets $63,505,387
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $462,894 $0 $36,680
Kathy Scanlan (Coo/Treasurer) $293,390 $0 $45,477
Nitin Baliga Phd (Svp Dir Of Integrative Science/Prof) $281,508 $0 $51,996
Ilya Shmulevich Phd (Professor) $246,704 $0 $49,798
Nathan Price Phd (Assoc Dir Integrative Science/Prof) $233,607 $0 $45,039
Robert L Mortiz Phd (Professor) $213,495 $0 $37,396
Sui Huang Md Phd (Professor) $185,884 $0 $31,909
Jennifer J Hadlock Md (Assistant Professor) $160,380 $0 $22,259
Amy Compton Phillips Md (Director) $0 $1,701,825 $248,465
Venkat Bhamidipati (Director) $0 $1,615,492 $304,802
Leroy Hood Md Phd (Director) $0 $1,139,151 $87,230
Thomas Brown Md (Vice Chairman Thru 2019) $0 $619,466 $35,178
Charles Watts Md (Board Chair) $0 $0 $0
Brian V Turner (Director) $0 $0 $0
Christine Schaeffer Phd (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
David Sabey (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Mary Woolley (Director) $0 $0 $0
Michael E Phelps Phd (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Stephen M Graham (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
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990
Filed on Nov. 9, 2020

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2018

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$31,249,334
Expenses
$33,125,028
Net Income
-$1,875,694
Net Assets
$63,067,652
Notable Sources of Revenue Percent of Total Revenue
Contributions $26,413,369
84.5%
Program Services $408,995
1.3%
Investment Income $1,373,439
4.4%
Bond Proceeds $0
Royalties $522,059
1.7%
Rental Property Income $510,312
1.6%
Net Fundraising -$19,775
Sales of Assets $1,853,760
5.9%
Net Inventory Sales $0
Other Revenue $187,175
0.6%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,300,374
3.9%
Professional Fundraising Fees $0
Other Salaries and Wages $11,940,911
36.0%
Assets/Debt
Total Assets $74,178,732
Total Liabilities $11,111,080
Net Assets $63,067,652
Compensation
Key Employees and Officers Compensation Related Other
James R Heath Phd (President/Professor) $464,466 $0 $36,152
Kathy Scanlan (Coo/Treasurer) $285,732 $0 $44,978
Nitin Baliga (Svp Dir Of Integrative Science/Prof) $270,838 $0 $51,207
Ilya Shmulevich Phd (Professor) $248,268 $0 $49,731
Nathan Price Phd (Assoc Dir Integrative Science/Profes) $233,612 $110,622 $62,241
Robert L Mortiz Phd (Professor) $211,492 $0 $37,120
Sui Huang Md Phd (Professor) $187,637 $0 $25,248
Jeffrey A Ranish Phd (Professor) $176,696 $0 $35,330
Jamie C Creola (Vp Of Education Thru 5/18) $95,947 $0 $18,878
Cynthia Shumate (Clo/Cco/Secretary Thru 1/18) $37,429 $0 $3,113
Thomas Brown Md (Vice Chairman) $0 $657,974 $106,233
Thomas Cable (Director) $0 $0 $0
Charles Chuck Watts Md (Director) $0 $509,406 $4,125
Amy Compton Phillips (Director) $0 $1,654,073 $667,254
Stephen Graham (Director) $0 $0 $0
Leroy Hood Md Phd (Director) $0 $1,097,995 $304,055
Douglas Howe (Director) $0 $0 $0
Daniel Ling (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
David Sabey (Board Chair) $0 $0 $0
Christine Schaeffer (Director) $0 $0 $0
Drew Senyei Md (Director) $0 $0 $0
Brian Turner (Director) $0 $0 $0
Mary Woolley (Director) $0 $0 $0
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990
Filed on Dec. 16, 2019

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
View Filing (2 of 2) PDF (2 of 2)
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
PDF (2 of 2)
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2017

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$31,226,281
Expenses
$31,854,012
Net Income
-$627,731
Net Assets
$71,749,749
Notable Sources of Revenue Percent of Total Revenue
Contributions $25,682,439
82.2%
Program Services $564,742
1.8%
Investment Income $1,346,016
4.3%
Bond Proceeds $0
Royalties $488,372
1.6%
Rental Property Income $295,789
0.9%
Net Fundraising -$17,816
Sales of Assets $2,561,320
8.2%
Net Inventory Sales $0
Other Revenue $305,419
1.0%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,065,643
3.3%
Professional Fundraising Fees $0
Other Salaries and Wages $11,252,237
35.3%
Assets/Debt
Total Assets $85,281,060
Total Liabilities $13,531,311
Net Assets $71,749,749
Compensation
Key Employees and Officers Compensation Related Other
Kathy Scanlan (Coo/Treasurer) $283,788 $0 $42,919
Nitin Baliga (Svp Dir Of Integrative Science/Prof) $269,136 $0 $59,153
Ilya Shmulevich Phd (Professor) $247,627 $0 $49,615
Nathan Price Phd (Assoc Dir Of Integrative Science/Profes) $233,752 $104,397 $61,269
Robert L Mortiz Phd (Professor) $217,443 $0 $31,017
Cynthia Shumate (Clo/Cco/Secretary) $183,487 $0 $44,892
Sui Huang Md Phd (Professor) $182,023 $0 $24,233
Jeffrey A Ranish Phd (Professor) $179,408 $0 $34,817
Jamie C Creola (Vice President Of Education) $155,507 $0 $26,761
Thomas Brown Md (Vice Chairman) $0 $756,979 $51,675
Thomas Cable (Director) $0 $0 $0
Stephen Graham (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Daniel Ling (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Drew Senyei Md (Director) $0 $0 $0
Brian Turner (Director) $0 $90,375 $11,940
Mary Woolley (Director) $0 $0 $0
Leroy Hood Md Phd (President/Director) $0 $1,059,067 $343,491
David Sabey (Board Chair) $0 $0 $0
Amy Compton Phillips Md (Director) $0 $1,491,216 $1,024,801
Charles Chuck Watts Md (Director) $0 $399,884 $191,190
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990
Filed on Nov. 14, 2018

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2016

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$87,151,283
Expenses
$32,600,250
Net Income
$54,551,033
Net Assets
$70,872,485
Notable Sources of Revenue Percent of Total Revenue
Contributions $25,993,600
29.8%
Program Services $400,866
0.5%
Investment Income $1,335,148
1.5%
Bond Proceeds $0
Royalties $684,691
0.8%
Rental Property Income $383,953
0.4%
Net Fundraising -$16,553
Sales of Assets $206,731
0.2%
Net Inventory Sales $0
Other Revenue $58,162,847
66.7%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,071,413
3.3%
Professional Fundraising Fees $0
Other Salaries and Wages $11,648,651
35.7%
Assets/Debt
Total Assets $83,864,265
Total Liabilities $12,991,780
Net Assets $70,872,485
Compensation
Key Employees and Officers Compensation Related Other
Scanlan Kathy (Coo/Treasurer) $283,952 $0 $39,416
Baliga Nitin (Vice President) $270,857 $0 $53,970
Shmulevish Ilya Ph D (Professor) $246,853 $0 $46,909
Price Nathan (Associate Director) $231,680 $0 $42,194
Shumate Cynthia (Chief Legal Ofc/Cco/Secretary) $231,468 $0 $45,152
Moritz Robert (Professor) $217,951 $0 $29,625
Huang Sui (Professor) $163,519 $0 $21,497
Range Lawrence (Director Of It) $161,535 $0 $30,306
Hood Leroy Md Ph D (President) $133,764 $625,187 $25,761
Bowes William K Jr (Director Dec. 12/16) $0 $0 $0
Brown Thomas Md (Director Eff. 4/16) $0 $717,288 $42,886
Cable Thomas (Director) $0 $0 $0
Compton Phillips Amy Md (Director Eff. 4/16) $0 $1,113,493 $278,894
Graham Stephen (Director) $0 $0 $0
Howe Douglas (Director) $0 $0 $0
Ling Daniel (Director) $0 $0 $0
Mundie Craig (Director) $0 $0 $0
Perlmutter Roger Md Ph D (Director) $0 $0 $0
Sabey David (Board Chair) $0 $0 $0
Senyei Drew Md (Director) $0 $0 $0
Turner Brian (Director) $0 $0 $0
Walker Douglas (Director) $0 $0 $0
Watts Charles Md (Director Eff. 4/16) $0 $9,180 $0
Woolley Mary (Director) $0 $0 $0
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990
Filed on Nov. 15, 2017

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2015

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$31,520,035
Expenses
$33,241,519
Net Income
-$1,721,484
Net Assets
$14,509,621
Notable Sources of Revenue Percent of Total Revenue
Contributions $29,000,917
92.0%
Program Services $554,699
1.8%
Investment Income $89,834
0.3%
Bond Proceeds $0
Royalties $1,116,233
3.5%
Rental Property Income $500,050
1.6%
Net Fundraising -$15,904
Sales of Assets $10,200
0.0%
Net Inventory Sales $0
Other Revenue $264,006
0.8%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,894,321
5.7%
Professional Fundraising Fees $0
Other Salaries and Wages $11,404,778
34.3%
Assets/Debt
Total Assets $38,939,866
Total Liabilities $24,430,245
Net Assets $14,509,621
Compensation
Key Employees and Officers Compensation Related Other
Leroy Hood Md Phd (President) $383,425 $0 $26,999
Mark Ashida (Treasurer, Secretary, & Coo) $330,229 $0 $10,686
Nitin Baliga Phd (Svp Director Of Integrative Science /Professor) $269,289 $0 $34,104
Ilya Shmulevich Phd (Professor) $250,505 $0 $44,042
Sui Huang Md Phd (Professor) $241,292 $0 $27,474
Cynthia Shumate Jd (Chief Legal Officer, Cco & Secretary) $234,160 $0 $45,575
Nathan Price Phd (Assoc. Dir. Of Integrative Science) $231,682 $0 $45,365
Kathy Scanlan (Treasurer & Chief Operating Officer) $231,182 $0 $34,126
Robert L Mortiz Phd (Associate Professor) $198,919 $0 $26,644
Jeffrey A Ranish Phd (Associate Professor) $162,427 $0 $31,403
Lawrence A Range (Director Of Information Technology) $145,625 $0 $31,136
John D Aitchison Phd (Professor /Former Officer (Svp)) $107,500 $0 $13,513
William K Bowes Jr (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
Stephen Graham (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
Drew Senyei Md (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
Mary Woolley (Director) $0 $0 $0
Douglas Walker (Director) $0 $0 $0
Brian Turner (Director) $0 $0 $0
David A Sabey (Director /Chair) $0 $0 $0
+ View more people

Document Links

990
Filed on Oct. 17, 2016

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
PDF (2 of 2)
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF
Audit

Audit for an entity that spends $750,000+ in federal grant money in a fiscal year

PDF

Fiscal Year Ending Dec.
2014

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$31,664,045
Expenses
$33,423,718
Net Income
-$1,759,673
Net Assets
$16,216,019
Notable Sources of Revenue Percent of Total Revenue
Contributions $29,320,438
92.6%
Program Services $949,413
3.0%
Investment Income $108,548
0.3%
Bond Proceeds $0
Royalties $502,488
1.6%
Rental Property Income $1,128,882
3.6%
Net Fundraising -$11,561
Sales of Assets -$394,448
Net Inventory Sales $0
Other Revenue $60,285
0.2%
Notable Expenses Percent of Total Expenses
Executive Compensation $2,216,050
6.6%
Professional Fundraising Fees $0
Other Salaries and Wages $11,200,070
33.5%
Assets/Debt
Total Assets $42,554,882
Total Liabilities $26,338,863
Net Assets $16,216,019
Other
Reported conflict of interest transactions
Compensation
Key Employees and Officers Compensation Related Other
Leroy Hood Md Phd (President) $381,379 $0 $31,147
Ee Sissy Bouchard Thru 1014 (Vp Development) $375,762 $0 $30,280
Robert J Lipshutz Thru 0414 (Svp Strategic Partnerships) $296,455 $0 $12,289
Mark Ashida (Treasurer, Secretary, & Coo) $275,707 $0 $46,337
Nitin Baliga Phd (Svp Director Of Integrative Science) $269,543 $0 $53,377
Sui Huang Md Phd (Professor) $241,421 $0 $27,162
Nathan Price Phd (Assoc Dir Of Integrative Science) $216,854 $0 $40,906
Ilya Shmulevich Phd (Professor) $199,316 $0 $36,674
Robert L Mortiz Phd (Associate Professor) $178,862 $0 $24,443
Jeffrey A Ranish Phd (Associate Professor) $162,651 $0 $30,394
Ron Myers (Vp & Chief Legal Officer) $151,323 $0 $22,972
Gary C Streicher (Director Of Finance) $134,925 $0 $33,664
John D Aitchison Phd (Professor, Former Officer) $107,500 $0 $12,935
Cynthia Shumate Jd (Chief Legal Officer, Cco & Secretary) $30,118 $0 $3,370
Louis G Lange Md Phd (Director) $0 $0 $0
William K Bowes Jr (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
Stephen Graham (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
Robert T Nelsen (Director) $0 $0 $0
Leighton Read (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
David A Sabey (Director/Chair) $0 $0 $0
Drew Senyei Md (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
See filing for compensation of 1 other people →
+ View more people

Document Links

990
Filed on Oct. 23, 2015

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2013

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$45,826,260
Expenses
$41,674,522
Net Income
$4,151,738
Net Assets
$18,038,454
Notable Sources of Revenue Percent of Total Revenue
Contributions $27,126,210
59.2%
Program Services $18,385,210
40.1%
Investment Income $101,840
0.2%
Bond Proceeds $0
Royalties $347,610
0.8%
Rental Property Income -$212,615
Net Fundraising -$8,434
Sales of Assets -$43,845
Net Inventory Sales $0
Other Revenue $130,284
0.3%
Notable Expenses Percent of Total Expenses
Executive Compensation $2,046,340
4.9%
Professional Fundraising Fees $0
Other Salaries and Wages $11,809,326
28.3%
Assets/Debt
Total Assets $47,653,059
Total Liabilities $29,614,605
Net Assets $18,038,454
Other
Reported conflict of interest transactions
Compensation
Key Employees and Officers Compensation Related Other
Robert J Lipshutz Phd (Svp Strategic Partnerships & Cbo) $501,652 $0 $39,004
Leroy Hood Md Phd (President) $381,559 $0 $30,567
Nitin Baliga (Svp Director Of Integrative Science /Professor) $287,218 $0 $53,472
Mark Ashida (Treasurer, Secretary, & Coo) $271,358 $0 $22,443
Sui Huang (Professor) $241,421 $0 $27,162
Ee Sissy Bouchard Edd (Vp Development) $208,661 $0 $34,905
Nathan Price (Assoc Dir Of Integrative Science) $206,964 $0 $41,510
Ilya Shmulevich (Professor) $199,226 $0 $38,351
Robert L Mortiz (Associate Professor) $179,042 $0 $24,263
James R Ladd Thru 613 (Treasurer, Secretary, Svp Fin & Op) $169,348 $0 $19,478
Richard E Gelinas (Sr Research Scientist) $137,883 $0 $18,836
John Aitchison Phd Thru 413 (Svp Research & Academic Affairs) $112,500 $0 $14,177
Louis G Lange Md Phd (Director/Chair) $0 $0 $0
William K Bowes Jr (Director) $0 $0 $0
Thomas J Cable (Director) $0 $0 $0
Stephen Graham (Director) $0 $0 $0
Daniel T Ling (Director) $0 $0 $0
Robert T Nelsen (Director) $0 $0 $0
Leighton Read (Director) $0 $0 $0
Roger Perlmutter Md Phd (Director) $0 $0 $0
David A Sabey (Director/Chair) $0 $0 $0
Drew Senyei Md (Director) $0 $0 $0
Craig Mundie (Director) $0 $0 $0
Douglas Howe (Director) $0 $0 $0
+ View more people

Document Links

990
Filed on Nov. 11, 2014

Primary tax return for a nonprofit’s activities, finances, and governance

View Filing
PDF XML
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2012

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$43,651,357
Expenses
$44,210,577
Net Income
-$559,220
Net Assets
$12,175,674
Notable Sources of Revenue Percent of Total Revenue
Contributions $24,894,172
57.0%
Program Services $18,458,193
42.3%
Investment Income $109,483
0.3%
Bond Proceeds $0
Royalties $262,489
0.6%
Rental Property Income -$125,990
Net Fundraising -$7,327
Sales of Assets $10,073
0.0%
Net Inventory Sales $0
Other Revenue $50,264
0.1%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,624,162
3.7%
Professional Fundraising Fees $0
Other Salaries and Wages $13,690,772
31.0%
Assets/Debt
Total Assets $43,517,471
Total Liabilities $31,341,797
Net Assets $12,175,674

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2011

Extracted Financial Data

Extracted Financial Data from Form 990
Revenue
$38,802,723
Expenses
$47,590,897
Net Income
-$8,788,174
Net Assets
$12,834,894
Notable Sources of Revenue Percent of Total Revenue
Contributions $23,892,848
61.6%
Program Services $15,963,894
41.1%
Investment Income $167,439
0.4%
Bond Proceeds $0
Royalties $211,917
0.5%
Rental Property Income $213,805
0.6%
Net Fundraising $0
Sales of Assets -$1,731,979
Net Inventory Sales $0
Other Revenue $84,799
0.2%
Notable Expenses Percent of Total Expenses
Executive Compensation $1,485,609
3.1%
Professional Fundraising Fees $0
Other Salaries and Wages $14,362,529
30.2%
Assets/Debt
Total Assets $45,477,682
Total Liabilities $32,642,788
Net Assets $12,834,894

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2010

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2009

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2008

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF
990-T

For unrelated business income from activities not substantially related to the organization's tax-exempt purpose

PDF

Fiscal Year Ending Dec.
2007

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2006

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2005

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2004

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2003

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2002

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

Fiscal Year Ending Dec.
2001

No Extracted Financial Data

Extracted financial data is not available for the forms filed in this tax period, but Form 990 documents are available for download.

Document Links

990

Primary tax return for a nonprofit’s activities, finances, and governance

PDF

About This Data

Nonprofit Explorer includes summary data for nonprofit tax returns and full Form 990 documents, in both PDF and digital formats.

The summary data contains information processed by the IRS during the 2012-2019 calendar years; this generally consists of filings for the 2011-2018 fiscal years, but may include older records. This data release includes only a subset of what can be found in the full Form 990s.

In addition to the raw summary data, we link to PDFs and digital copies of full Form 990 documents wherever possible. This consists of separate releases by the IRS of Form 990 documents processed by the agency, which we update regularly.

We also link to copies of audits nonprofit organizations that spent $750,000 or more in Federal grant money in a single fiscal year since 2016. These audits are copied from the Federal Audit Clearinghouse.

Which Organizations Are Here?

Every organization that has been recognized as tax exempt by the IRS has to file Form 990 every year, unless they make less than $200,000 in revenue and have less than $500,000 in assets, in which case they have to file form 990-EZ. Organizations making less than $50,000 don’t have to file either form but do have to let the IRS they’re still in business via a Form 990N "e-Postcard."

Nonprofit Explorer has organizations claiming tax exemption in each of the 27 subsections of the 501(c) section of the tax code, and which have filed a Form 990, Form 990EZ or Form 990PF. Taxable trusts and private foundations that are required to file a form 990PF are also included. Small organizations filing a Form 990N "e-Postcard" are not included in this data.

Types of Nonprofits

There are 27 nonprofit designations based on the numbered subsections of section 501(c) of the tax code. See the list »

Get the Data

For those interested in acquiring the original data from the source, here’s where our data comes from:

  • Raw filing data. Includes EINs and summary financials as structured data.
  • Exempt Organization profiles. Includes organization names, addresses, etc. You can merge this with the raw filing data using EIN numbers.
  • Form 990 documents. Prior to 2017, these documents were obtained and processed by Public.Resource.org and ProPublica. Bulk PDF downloads since 2017 are available from the IRS.
  • Form 990 documents as XML files. Includes complete filing data (financial details, names of officers, tax schedules, etc.) in machine-readable format. Only available for electronically filed documents. Electronic data released prior to October 2021 is also available through Amazon Web Services.
  • Audits. PDFs of single or program-specific audits for nonprofit organizations that spent $750,000 or more in Federal grant money in a single fiscal year. Available for fiscal year 2015 and later.

API

The data powering this website is available programmatically, via an API. Read the API documentation »

Byline

By Andrea Suozzo, Alec Glassford and Ash Ngu, ProPublica, and Brandon Roberts, Special to ProPublica.
Design by Jeff Frankl. Additional development by Ken Schwencke, Mike Tigas, and Sisi Wei.

E-file viewer adapted from IRS e-File Viewer by Ben Getson. Code for scraping audit documents adapated from Govwiki.

Updated